Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 LINC02447-202ENST00000501888 2146 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 AL671710.1-201ENST00000610245 2349 ntBASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCGF3Q3KNV8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 RNU1-129P-201ENST00000384064 167 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AP000344.2-201ENST00000512987 629 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 U1.21-201ENST00000580816 167 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 MIR4492-201ENST00000581627 80 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AC021097.1-201ENST00000607902 574 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CDC14C-201ENST00000428251 1719 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 AC092919.2-201ENST00000623631 1645 ntBASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PCGF3Q3KNV8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 AKAP8P1-201ENST00000434743 1349 ntBASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 AP001160.2-201ENST00000596071 487 ntBASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCGF3Q3KNV8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms