Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.92□□□□□ -0.02
RFX4Q33E94 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 AC012569.1-201ENST00000591191 1524 ntBASIC14.92□□□□□ -0.02
RFX4Q33E94 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFX4Q33E94 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
RFX4Q33E94 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 AC232323.1-201ENST00000540724 2099 ntBASIC14.91□□□□□ -0.02
RFX4Q33E94 REXO1L5P-201ENST00000622260 2098 ntBASIC14.91□□□□□ -0.02
RFX4Q33E94 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RFX4Q33E94 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 AC073648.2-201ENST00000510116 352 ntBASIC14.91□□□□□ -0.02
RFX4Q33E94 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 MIR1199-201ENST00000621445 119 ntBASIC14.91□□□□□ -0.02
RFX4Q33E94 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.91□□□□□ -0.02
RFX4Q33E94 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.91□□□□□ -0.02
RFX4Q33E94 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 C18orf15-201ENST00000623680 2534 ntBASIC14.91□□□□□ -0.02
RFX4Q33E94 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RFX4Q33E94 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFX4Q33E94 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
RFX4Q33E94 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFX4Q33E94 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RFX4Q33E94 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RFX4Q33E94 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFX4Q33E94 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.9□□□□□ -0.02
RFX4Q33E94 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
RFX4Q33E94 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFX4Q33E94 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.9□□□□□ -0.02
RFX4Q33E94 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RFX4Q33E94 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.9□□□□□ -0.02
RFX4Q33E94 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.9□□□□□ -0.02
RFX4Q33E94 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFX4Q33E94 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.9□□□□□ -0.02
RFX4Q33E94 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFX4Q33E94 RNPS1P1-201ENST00000507437 918 ntBASIC14.9□□□□□ -0.02
RFX4Q33E94 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.9□□□□□ -0.02
RFX4Q33E94 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.9□□□□□ -0.02
RFX4Q33E94 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms