Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH1Q08174 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH1Q08174 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PCDH1Q08174 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.42■□□□□ 0.06
PCDH1Q08174 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.42■□□□□ 0.06
PCDH1Q08174 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.42■□□□□ 0.06
PCDH1Q08174 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PCDH1Q08174 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PCDH1Q08174 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH1Q08174 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PCDH1Q08174 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDH1Q08174 AL353705.2-201ENST00000428243 662 ntBASIC15.41■□□□□ 0.06
PCDH1Q08174 SPDYE14P-201ENST00000442619 822 ntBASIC15.41■□□□□ 0.06
PCDH1Q08174 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDH1Q08174 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDH1Q08174 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.41■□□□□ 0.06
PCDH1Q08174 AC010327.4-202ENST00000591484 748 ntBASIC15.41■□□□□ 0.06
PCDH1Q08174 AC007967.4-201ENST00000614700 386 ntBASIC15.41■□□□□ 0.06
PCDH1Q08174 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH1Q08174 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDH1Q08174 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDH1Q08174 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
PCDH1Q08174 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDH1Q08174 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDH1Q08174 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PCDH1Q08174 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PCDH1Q08174 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 FO393414.2-201ENST00000405153 598 ntBASIC15.4■□□□□ 0.06
PCDH1Q08174 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH1Q08174 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH1Q08174 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDH1Q08174 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
PCDH1Q08174 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
PCDH1Q08174 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDH1Q08174 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDH1Q08174 AL450472.2-201ENST00000603663 1156 ntBASIC15.4■□□□□ 0.06
PCDH1Q08174 AP001059.3-201ENST00000619053 235 ntBASIC15.4■□□□□ 0.06
PCDH1Q08174 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDH1Q08174 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDH1Q08174 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDH1Q08174 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDH1Q08174 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.39■□□□□ 0.06
PCDH1Q08174 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH1Q08174 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDH1Q08174 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH1Q08174 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDH1Q08174 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms