Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDKL1Q00532 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CDKL1Q00532 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDKL1Q00532 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.76■□□□□ 0.11
CDKL1Q00532 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.76■□□□□ 0.11
CDKL1Q00532 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDKL1Q00532 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDKL1Q00532 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDKL1Q00532 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CDKL1Q00532 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.75■□□□□ 0.11
CDKL1Q00532 HLA-H-201ENST00000383620 1096 ntBASIC15.75■□□□□ 0.11
CDKL1Q00532 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 ALG1L5P-201ENST00000482043 771 ntBASIC15.75■□□□□ 0.11
CDKL1Q00532 YBX1P5-201ENST00000509441 847 ntBASIC15.75■□□□□ 0.11
CDKL1Q00532 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 IGHV3-62-201ENST00000520057 340 ntBASIC15.75■□□□□ 0.11
CDKL1Q00532 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.75■□□□□ 0.11
CDKL1Q00532 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 AC005829.1-201ENST00000570002 483 ntBASIC15.75■□□□□ 0.11
CDKL1Q00532 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.75■□□□□ 0.11
CDKL1Q00532 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.75■□□□□ 0.11
CDKL1Q00532 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
CDKL1Q00532 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.75■□□□□ 0.11
CDKL1Q00532 AC138035.3-201ENST00000622706 2791 ntBASIC15.75■□□□□ 0.11
CDKL1Q00532 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.75■□□□□ 0.11
CDKL1Q00532 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.75■□□□□ 0.11
CDKL1Q00532 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDKL1Q00532 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 CICP13-201ENST00000422015 2789 ntBASIC15.74■□□□□ 0.11
CDKL1Q00532 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.74■□□□□ 0.11
CDKL1Q00532 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 AP000347.1-202ENST00000435868 847 ntBASIC15.74■□□□□ 0.11
CDKL1Q00532 TIMM8BP1-201ENST00000452384 211 ntBASIC15.74■□□□□ 0.11
CDKL1Q00532 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKL1Q00532 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.74■□□□□ 0.11
CDKL1Q00532 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.74■□□□□ 0.11
CDKL1Q00532 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.74■□□□□ 0.11
CDKL1Q00532 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.74■□□□□ 0.11
CDKL1Q00532 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDKL1Q00532 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKL1Q00532 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.73■□□□□ 0.11
CDKL1Q00532 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKL1Q00532 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKL1Q00532 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDKL1Q00532 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms