Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB1P98172 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB1P98172 AL450472.2-201ENST00000603663 1156 ntBASIC14.26□□□□□ -0.13
EFNB1P98172 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.26□□□□□ -0.13
EFNB1P98172 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.26□□□□□ -0.13
EFNB1P98172 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
EFNB1P98172 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
EFNB1P98172 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 GRK6P1-201ENST00000400595 1711 ntBASIC14.25□□□□□ -0.13
EFNB1P98172 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB1P98172 AL031284.1-201ENST00000419297 478 ntBASIC14.25□□□□□ -0.13
EFNB1P98172 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB1P98172 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
EFNB1P98172 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.25□□□□□ -0.13
EFNB1P98172 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 AL691432.3-201ENST00000621860 400 ntBASIC14.25□□□□□ -0.13
EFNB1P98172 AC004877.2-201ENST00000623941 599 ntBASIC14.25□□□□□ -0.13
EFNB1P98172 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
EFNB1P98172 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 AL359258.3-201ENST00000622910 2331 ntBASIC14.25□□□□□ -0.13
EFNB1P98172 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EFNB1P98172 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EFNB1P98172 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EFNB1P98172 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EFNB1P98172 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
EFNB1P98172 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB1P98172 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNB1P98172 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.24□□□□□ -0.13
EFNB1P98172 AC079781.3-201ENST00000449110 356 ntBASIC14.24□□□□□ -0.13
EFNB1P98172 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.24□□□□□ -0.13
EFNB1P98172 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.24□□□□□ -0.13
EFNB1P98172 KRT19P2-202ENST00000557173 1012 ntBASIC14.24□□□□□ -0.13
EFNB1P98172 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.24□□□□□ -0.13
EFNB1P98172 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.24□□□□□ -0.13
EFNB1P98172 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms