Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TPM4P67936 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TPM4P67936 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TPM4P67936 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.97■□□□□ 0.47
TPM4P67936 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.97■□□□□ 0.47
TPM4P67936 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 AC091304.2-201ENST00000564639 760 ntBASIC17.97■□□□□ 0.47
TPM4P67936 REXO1L6P-202ENST00000619970 1078 ntBASIC17.97■□□□□ 0.47
TPM4P67936 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.97■□□□□ 0.47
TPM4P67936 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TPM4P67936 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
TPM4P67936 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM4P67936 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TPM4P67936 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.96■□□□□ 0.47
TPM4P67936 AL645728.2-201ENST00000641974 660 ntBASIC17.96■□□□□ 0.47
TPM4P67936 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TPM4P67936 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TPM4P67936 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM4P67936 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM4P67936 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TPM4P67936 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TPM4P67936 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM4P67936 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.95■□□□□ 0.46
TPM4P67936 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM4P67936 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM4P67936 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TPM4P67936 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.95■□□□□ 0.46
TPM4P67936 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TPM4P67936 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM4P67936 AL031432.2-201ENST00000566714 459 ntBASIC17.95■□□□□ 0.46
TPM4P67936 AL928711.1-201ENST00000570165 459 ntBASIC17.95■□□□□ 0.46
TPM4P67936 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TPM4P67936 AC005593.1-201ENST00000624894 515 ntBASIC17.95■□□□□ 0.46
TPM4P67936 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM4P67936 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms