Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLDN12P56749 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.96□□□□□ -0.17
CLDN12P56749 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN12P56749 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN12P56749 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN12P56749 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CLDN12P56749 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN12P56749 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.96□□□□□ -0.18
CLDN12P56749 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN12P56749 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.96□□□□□ -0.18
CLDN12P56749 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN12P56749 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.96□□□□□ -0.18
CLDN12P56749 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN12P56749 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN12P56749 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.18
CLDN12P56749 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 RNU1-129P-201ENST00000384064 167 ntBASIC13.95□□□□□ -0.18
CLDN12P56749 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN12P56749 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CLDN12P56749 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN12P56749 U1.21-201ENST00000580816 167 ntBASIC13.95□□□□□ -0.18
CLDN12P56749 AC021097.1-201ENST00000607902 574 ntBASIC13.95□□□□□ -0.18
CLDN12P56749 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN12P56749 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.95□□□□□ -0.18
CLDN12P56749 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 AL358472.4-201ENST00000633140 710 ntBASIC13.95□□□□□ -0.18
CLDN12P56749 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLDN12P56749 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
CLDN12P56749 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN12P56749 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN12P56749 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLDN12P56749 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN12P56749 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN12P56749 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN12P56749 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 SCARNA2-201ENST00000458748 420 ntBASIC13.94□□□□□ -0.18
CLDN12P56749 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 AL031055.1-201ENST00000606362 631 ntBASIC13.94□□□□□ -0.18
CLDN12P56749 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.94□□□□□ -0.18
CLDN12P56749 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN12P56749 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms