Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.77■□□□□ 0.6
CACNB3P54284 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CACNB3P54284 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.77■□□□□ 0.6
CACNB3P54284 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 BAATP1-201ENST00000412284 1225 ntBASIC18.77■□□□□ 0.6
CACNB3P54284 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CACNB3P54284 AL355864.2-201ENST00000447420 863 ntBASIC18.77■□□□□ 0.6
CACNB3P54284 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.77■□□□□ 0.6
CACNB3P54284 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.77■□□□□ 0.6
CACNB3P54284 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.77■□□□□ 0.6
CACNB3P54284 FAM8A2P-201ENST00000528813 1142 ntBASIC18.77■□□□□ 0.6
CACNB3P54284 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.77■□□□□ 0.6
CACNB3P54284 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CACNB3P54284 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CACNB3P54284 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CACNB3P54284 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CACNB3P54284 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CACNB3P54284 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CACNB3P54284 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CACNB3P54284 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
CACNB3P54284 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CACNB3P54284 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CACNB3P54284 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CACNB3P54284 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNB3P54284 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CACNB3P54284 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.76■□□□□ 0.59
CACNB3P54284 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNB3P54284 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.76■□□□□ 0.59
CACNB3P54284 RPL13AP25-201ENST00000484130 612 ntBASIC18.76■□□□□ 0.59
CACNB3P54284 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.76■□□□□ 0.59
CACNB3P54284 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.76■□□□□ 0.59
CACNB3P54284 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 AL606495.2-201ENST00000605867 535 ntBASIC18.76■□□□□ 0.59
CACNB3P54284 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.76■□□□□ 0.59
CACNB3P54284 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CACNB3P54284 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNB3P54284 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
CACNB3P54284 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 PCDH8P1-201ENST00000428983 2773 ntBASIC18.75■□□□□ 0.59
CACNB3P54284 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CACNB3P54284 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNB3P54284 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 AC012441.1-201ENST00000446669 685 ntBASIC18.75■□□□□ 0.59
CACNB3P54284 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.75■□□□□ 0.59
CACNB3P54284 MIR6869-201ENST00000619434 62 ntBASIC18.75■□□□□ 0.59
CACNB3P54284 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.75■□□□□ 0.59
CACNB3P54284 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CACNB3P54284 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 AD000864.1-201ENST00000624076 2295 ntBASIC18.75■□□□□ 0.59
CACNB3P54284 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CACNB3P54284 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CACNB3P54284 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CACNB3P54284 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.74■□□□□ 0.59
CACNB3P54284 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNB3P54284 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNB3P54284 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.74■□□□□ 0.59
CACNB3P54284 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNB3P54284 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CACNB3P54284 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNB3P54284 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.74■□□□□ 0.59
CACNB3P54284 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CACNB3P54284 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms