Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 KRT18P3-201ENST00000451602 1288 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC25A1P53007 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 AL450472.2-201ENST00000603663 1156 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 C18orf15-201ENST00000623680 2534 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC25A1P53007 AC127383.1-201ENST00000444697 1800 ntBASIC14.2□□□□□ -0.14
SLC25A1P53007 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC25A1P53007 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC25A1P53007 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 AL136982.4-201ENST00000437689 1740 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 KRT8P37-201ENST00000451609 1420 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 AL590627.1-203ENST00000421194 1026 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 MED15P5-201ENST00000423150 992 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 AL645939.2-201ENST00000427340 991 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC25A1P53007 AL139010.1-201ENST00000454878 894 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC25A1P53007 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC25A1P53007 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC25A1P53007 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC25A1P53007 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 AC140113.2-201ENST00000604370 208 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SLC25A1P53007 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC25A1P53007 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 KRT8P44-201ENST00000441609 1350 ntBASIC14.19□□□□□ -0.14
SLC25A1P53007 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC25A1P53007 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLC25A1P53007 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC25A1P53007 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SLC25A1P53007 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC25A1P53007 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SLC25A1P53007 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC25A1P53007 CYP4F24P-201ENST00000586049 1580 ntBASIC14.18□□□□□ -0.14
SLC25A1P53007 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC25A1P53007 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms