Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.49■□□□□ 0.71
NUP98P52948 GOLGA2P4-201ENST00000441462 777 ntBASIC19.49■□□□□ 0.71
NUP98P52948 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.49■□□□□ 0.71
NUP98P52948 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.49■□□□□ 0.71
NUP98P52948 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.49■□□□□ 0.71
NUP98P52948 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NUP98P52948 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NUP98P52948 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.49■□□□□ 0.71
NUP98P52948 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NUP98P52948 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.49■□□□□ 0.71
NUP98P52948 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.49■□□□□ 0.71
NUP98P52948 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NUP98P52948 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
NUP98P52948 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.48■□□□□ 0.71
NUP98P52948 POM121L8P-201ENST00000417732 1281 ntBASIC19.48■□□□□ 0.71
NUP98P52948 GPAA1P2-201ENST00000417923 928 ntBASIC19.48■□□□□ 0.71
NUP98P52948 POM121L9P-203ENST00000441984 1285 ntBASIC19.48■□□□□ 0.71
NUP98P52948 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NUP98P52948 AC104306.2-201ENST00000451877 341 ntBASIC19.48■□□□□ 0.71
NUP98P52948 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.48■□□□□ 0.71
NUP98P52948 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.48■□□□□ 0.71
NUP98P52948 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.48■□□□□ 0.71
NUP98P52948 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.48■□□□□ 0.71
NUP98P52948 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.48■□□□□ 0.71
NUP98P52948 AL596087.1-201ENST00000400979 1969 ntBASIC19.48■□□□□ 0.71
NUP98P52948 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
NUP98P52948 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
NUP98P52948 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.48■□□□□ 0.71
NUP98P52948 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 FAM197Y7-201ENST00000432892 766 ntBASIC19.48■□□□□ 0.71
NUP98P52948 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.48■□□□□ 0.71
NUP98P52948 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 AP005019.2-201ENST00000615104 511 ntBASIC19.48■□□□□ 0.71
NUP98P52948 BX539320.1-201ENST00000623759 877 ntBASIC19.48■□□□□ 0.71
NUP98P52948 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.48■□□□□ 0.71
NUP98P52948 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NUP98P52948 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NUP98P52948 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NUP98P52948 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NUP98P52948 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 AL138799.1-201ENST00000448213 1675 ntBASIC19.47■□□□□ 0.71
NUP98P52948 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
NUP98P52948 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
NUP98P52948 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.47■□□□□ 0.71
NUP98P52948 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.47■□□□□ 0.71
NUP98P52948 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.47■□□□□ 0.71
NUP98P52948 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.47■□□□□ 0.71
NUP98P52948 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.47■□□□□ 0.71
NUP98P52948 AC006453.4-201ENST00000636949 1252 ntBASIC19.47■□□□□ 0.71
NUP98P52948 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.47■□□□□ 0.71
NUP98P52948 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.47■□□□□ 0.71
NUP98P52948 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.47■□□□□ 0.71
NUP98P52948 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
NUP98P52948 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NUP98P52948 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NUP98P52948 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.46■□□□□ 0.71
NUP98P52948 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.46■□□□□ 0.71
NUP98P52948 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NUP98P52948 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.46■□□□□ 0.71
NUP98P52948 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NUP98P52948 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 AL354989.2-201ENST00000435838 1540 ntBASIC19.46■□□□□ 0.71
NUP98P52948 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms