Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CLCN4P51793 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CLCN4P51793 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CLCN4P51793 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLCN4P51793 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLCN4P51793 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN4P51793 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLCN4P51793 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
CLCN4P51793 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLCN4P51793 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN4P51793 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCN4P51793 C1QBPP1-201ENST00000400117 770 ntBASIC16.7■□□□□ 0.26
CLCN4P51793 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLCN4P51793 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN4P51793 PHKG1P2-201ENST00000457537 863 ntBASIC16.7■□□□□ 0.26
CLCN4P51793 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.7■□□□□ 0.26
CLCN4P51793 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCN4P51793 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 AC120045.2-201ENST00000567334 178 ntBASIC16.7■□□□□ 0.26
CLCN4P51793 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCN4P51793 CLUHP6-201ENST00000580789 941 ntBASIC16.7■□□□□ 0.26
CLCN4P51793 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
CLCN4P51793 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCN4P51793 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCN4P51793 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN4P51793 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN4P51793 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCN4P51793 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CLCN4P51793 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLCN4P51793 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 AP001282.1-201ENST00000531301 1499 ntBASIC16.69■□□□□ 0.26
CLCN4P51793 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCN4P51793 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CLCN4P51793 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 AC092933.1-201ENST00000393644 945 ntBASIC16.69■□□□□ 0.26
CLCN4P51793 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCN4P51793 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 AL355864.2-201ENST00000447420 863 ntBASIC16.69■□□□□ 0.26
CLCN4P51793 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCN4P51793 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 AP000812.2-201ENST00000538934 718 ntBASIC16.69■□□□□ 0.26
CLCN4P51793 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCN4P51793 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCN4P51793 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLCN4P51793 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCN4P51793 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCN4P51793 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCN4P51793 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CLCN4P51793 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CLCN4P51793 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 AC136604.1-201ENST00000418535 575 ntBASIC16.68■□□□□ 0.26
CLCN4P51793 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 VDAC1P7-201ENST00000462417 847 ntBASIC16.68■□□□□ 0.26
CLCN4P51793 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms