Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.11■□□□□ 0.01
KNTC1P50748 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 LETM1P2-201ENST00000597330 2178 ntBASIC15.11■□□□□ 0.01
KNTC1P50748 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KNTC1P50748 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.11■□□□□ 0.01
KNTC1P50748 FAM86HP-204ENST00000513466 959 ntBASIC15.11■□□□□ 0.01
KNTC1P50748 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.11■□□□□ 0.01
KNTC1P50748 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.11■□□□□ 0.01
KNTC1P50748 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
KNTC1P50748 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.1■□□□□ 0.01
KNTC1P50748 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 INTS4P2-202ENST00000614726 2019 ntBASIC15.1■□□□□ 0.01
KNTC1P50748 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KNTC1P50748 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.1■□□□□ 0.01
KNTC1P50748 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.1■□□□□ 0.01
KNTC1P50748 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
KNTC1P50748 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
KNTC1P50748 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.1■□□□□ 0.01
KNTC1P50748 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.1■□□□□ 0.01
KNTC1P50748 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KNTC1P50748 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.09■□□□□ 0.01
KNTC1P50748 AL607033.1-201ENST00000623900 1599 ntBASIC15.09■□□□□ 0.01
KNTC1P50748 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KNTC1P50748 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
KNTC1P50748 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
KNTC1P50748 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
KNTC1P50748 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.09■□□□□ 0.01
KNTC1P50748 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.09■□□□□ 0.01
KNTC1P50748 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.09■□□□□ 0.01
KNTC1P50748 AC004898.1-201ENST00000451057 766 ntBASIC15.09■□□□□ 0.01
KNTC1P50748 VDAC1P7-201ENST00000462417 847 ntBASIC15.09■□□□□ 0.01
KNTC1P50748 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.09■□□□□ 0.01
KNTC1P50748 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.09■□□□□ 0.01
KNTC1P50748 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.09■□□□□ 0.01
KNTC1P50748 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.09■□□□□ 0.01
KNTC1P50748 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms