Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.85■□□□□ 0.29
TUBP50607 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.85■□□□□ 0.29
TUBP50607 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TUBP50607 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.85■□□□□ 0.29
TUBP50607 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.85■□□□□ 0.29
TUBP50607 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.85■□□□□ 0.29
TUBP50607 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TUBP50607 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.84■□□□□ 0.29
TUBP50607 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.84■□□□□ 0.29
TUBP50607 AC010336.2-201ENST00000564226 506 ntBASIC16.84■□□□□ 0.29
TUBP50607 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.84■□□□□ 0.29
TUBP50607 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBP50607 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.84■□□□□ 0.29
TUBP50607 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.84■□□□□ 0.29
TUBP50607 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TUBP50607 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.84■□□□□ 0.29
TUBP50607 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TUBP50607 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TUBP50607 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TUBP50607 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
TUBP50607 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
TUBP50607 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TUBP50607 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TUBP50607 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TUBP50607 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.83■□□□□ 0.28
TUBP50607 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBP50607 COX20P2-201ENST00000452636 358 ntBASIC16.83■□□□□ 0.28
TUBP50607 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBP50607 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.83■□□□□ 0.28
TUBP50607 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.83■□□□□ 0.28
TUBP50607 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.83■□□□□ 0.28
TUBP50607 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.83■□□□□ 0.28
TUBP50607 AL512361.1-201ENST00000554200 418 ntBASIC16.83■□□□□ 0.28
TUBP50607 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.83■□□□□ 0.28
TUBP50607 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBP50607 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.83■□□□□ 0.28
TUBP50607 AL033527.5-202ENST00000641632 1098 ntBASIC16.83■□□□□ 0.28
TUBP50607 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TUBP50607 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBP50607 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms