Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRIM2P49643 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRIM2P49643 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 FAM45BP-202ENST00000592932 1624 ntBASIC15.28■□□□□ 0.04
PRIM2P49643 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 MIR940-201ENST00000401276 94 ntBASIC15.28■□□□□ 0.04
PRIM2P49643 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 AP002472.1-201ENST00000577490 586 ntBASIC15.28■□□□□ 0.04
PRIM2P49643 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.28■□□□□ 0.04
PRIM2P49643 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.28■□□□□ 0.04
PRIM2P49643 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.28■□□□□ 0.04
PRIM2P49643 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRIM2P49643 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRIM2P49643 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PRIM2P49643 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRIM2P49643 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.27■□□□□ 0.04
PRIM2P49643 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PRIM2P49643 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRIM2P49643 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.27■□□□□ 0.04
PRIM2P49643 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRIM2P49643 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRIM2P49643 AC126177.1-201ENST00000547829 2218 ntBASIC15.27■□□□□ 0.04
PRIM2P49643 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRIM2P49643 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PRIM2P49643 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.27■□□□□ 0.04
PRIM2P49643 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.27■□□□□ 0.04
PRIM2P49643 AP000347.1-202ENST00000435868 847 ntBASIC15.27■□□□□ 0.04
PRIM2P49643 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
PRIM2P49643 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.27■□□□□ 0.04
PRIM2P49643 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.27■□□□□ 0.04
PRIM2P49643 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.27■□□□□ 0.04
PRIM2P49643 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRIM2P49643 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.27■□□□□ 0.04
PRIM2P49643 LINC02228-204ENST00000642115 2962 ntBASIC15.27■□□□□ 0.04
PRIM2P49643 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.27■□□□□ 0.03
PRIM2P49643 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRIM2P49643 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRIM2P49643 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PRIM2P49643 TCAF2P1-201ENST00000291129 2421 ntBASIC15.27■□□□□ 0.03
PRIM2P49643 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PRIM2P49643 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRIM2P49643 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.27■□□□□ 0.03
PRIM2P49643 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRIM2P49643 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PRIM2P49643 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRIM2P49643 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.27■□□□□ 0.03
PRIM2P49643 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.26■□□□□ 0.03
PRIM2P49643 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PRIM2P49643 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.26■□□□□ 0.03
PRIM2P49643 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 HAUS4P1-201ENST00000406739 1145 ntBASIC15.26■□□□□ 0.03
PRIM2P49643 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRIM2P49643 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 AL365330.1-201ENST00000607459 531 ntBASIC15.26■□□□□ 0.03
PRIM2P49643 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.26■□□□□ 0.03
PRIM2P49643 AC092865.6-201ENST00000642101 219 ntBASIC15.26■□□□□ 0.03
PRIM2P49643 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.26■□□□□ 0.03
PRIM2P49643 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRIM2P49643 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms