Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SRP9P49458 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 AC025580.3-201ENST00000617932 1424 ntBASIC14.25□□□□□ -0.13
SRP9P49458 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 AC069224.1-201ENST00000566372 1715 ntBASIC14.25□□□□□ -0.13
SRP9P49458 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.25□□□□□ -0.13
SRP9P49458 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.25□□□□□ -0.13
SRP9P49458 AP000347.1-202ENST00000435868 847 ntBASIC14.25□□□□□ -0.13
SRP9P49458 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.25□□□□□ -0.13
SRP9P49458 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.25□□□□□ -0.13
SRP9P49458 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.25□□□□□ -0.13
SRP9P49458 KRT19P2-202ENST00000557173 1012 ntBASIC14.25□□□□□ -0.13
SRP9P49458 MIR4492-201ENST00000581627 80 ntBASIC14.25□□□□□ -0.13
SRP9P49458 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.25□□□□□ -0.13
SRP9P49458 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 CYP2A7P1-201ENST00000595391 815 ntBASIC14.25□□□□□ -0.13
SRP9P49458 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.25□□□□□ -0.13
SRP9P49458 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.25□□□□□ -0.13
SRP9P49458 SLC22A20-204ENST00000530038 1673 ntBASIC14.25□□□□□ -0.13
SRP9P49458 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.25□□□□□ -0.13
SRP9P49458 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SRP9P49458 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.25□□□□□ -0.13
SRP9P49458 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.25□□□□□ -0.13
SRP9P49458 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.25□□□□□ -0.13
SRP9P49458 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SRP9P49458 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SRP9P49458 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.24□□□□□ -0.13
SRP9P49458 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.24□□□□□ -0.13
SRP9P49458 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.24□□□□□ -0.13
SRP9P49458 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.24□□□□□ -0.13
SRP9P49458 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SRP9P49458 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SRP9P49458 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SRP9P49458 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms