Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.41□□□□□ -0.1
ATRXP46100 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.41□□□□□ -0.1
ATRXP46100 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.41□□□□□ -0.1
ATRXP46100 AL161670.2-201ENST00000557650 1227 ntBASIC14.41□□□□□ -0.1
ATRXP46100 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.41□□□□□ -0.1
ATRXP46100 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ATRXP46100 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ATRXP46100 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.41□□□□□ -0.1
ATRXP46100 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC14.41□□□□□ -0.1
ATRXP46100 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.41□□□□□ -0.1
ATRXP46100 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.41□□□□□ -0.1
ATRXP46100 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ATRXP46100 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ATRXP46100 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ATRXP46100 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 DRD5P1-201ENST00000456605 1438 ntBASIC14.4□□□□□ -0.1
ATRXP46100 AC018470.1-201ENST00000624790 3129 ntBASIC14.4□□□□□ -0.1
ATRXP46100 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 AL008707.1-201ENST00000422498 534 ntBASIC14.4□□□□□ -0.1
ATRXP46100 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
ATRXP46100 AL590640.2-201ENST00000457038 527 ntBASIC14.4□□□□□ -0.1
ATRXP46100 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 AC022217.1-201ENST00000521069 738 ntBASIC14.4□□□□□ -0.1
ATRXP46100 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.4□□□□□ -0.1
ATRXP46100 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.4□□□□□ -0.1
ATRXP46100 AC091544.8-201ENST00000619490 361 ntBASIC14.4□□□□□ -0.1
ATRXP46100 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.4□□□□□ -0.1
ATRXP46100 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 TUBBP5-203ENST00000508529 1334 ntBASIC14.4□□□□□ -0.1
ATRXP46100 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ATRXP46100 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
ATRXP46100 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.4□□□□□ -0.1
ATRXP46100 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 FAM197Y7-201ENST00000432892 766 ntBASIC14.4□□□□□ -0.1
ATRXP46100 AC012362.1-201ENST00000434906 739 ntBASIC14.4□□□□□ -0.1
ATRXP46100 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.4□□□□□ -0.1
ATRXP46100 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.4□□□□□ -0.1
ATRXP46100 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.4□□□□□ -0.1
ATRXP46100 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.4□□□□□ -0.1
ATRXP46100 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.4□□□□□ -0.1
ATRXP46100 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.4□□□□□ -0.1
ATRXP46100 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.4□□□□□ -0.1
ATRXP46100 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ATRXP46100 AL603756.1-201ENST00000606511 2163 ntBASIC14.4□□□□□ -0.1
ATRXP46100 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ATRXP46100 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.4□□□□□ -0.1
ATRXP46100 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
ATRXP46100 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.11
ATRXP46100 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.39□□□□□ -0.11
ATRXP46100 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
ATRXP46100 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
ATRXP46100 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.39□□□□□ -0.11
ATRXP46100 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.39□□□□□ -0.11
ATRXP46100 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ATRXP46100 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ATRXP46100 AL138781.2-201ENST00000617896 1843 ntBASIC14.39□□□□□ -0.11
ATRXP46100 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms