Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 FAM86EP-206ENST00000510506 987 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB3BP20337 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB3BP20337 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.07□□□□□ -0.16
RAB3BP20337 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
RAB3BP20337 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB3BP20337 AC116407.4-201ENST00000623319 1061 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB3BP20337 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 AC007686.3-201ENST00000619017 3487 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RAB3BP20337 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 AL390755.1-201ENST00000623716 2027 ntBASIC14.07□□□□□ -0.16
RAB3BP20337 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB3BP20337 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB3BP20337 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB3BP20337 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RAB3BP20337 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 AC006504.4-201ENST00000592118 1568 ntBASIC14.06□□□□□ -0.16
RAB3BP20337 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB3BP20337 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB3BP20337 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
RAB3BP20337 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB3BP20337 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 AL365330.1-201ENST00000607459 531 ntBASIC14.06□□□□□ -0.16
RAB3BP20337 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB3BP20337 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 GRK6P1-201ENST00000400595 1711 ntBASIC14.06□□□□□ -0.16
RAB3BP20337 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB3BP20337 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB3BP20337 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RAB3BP20337 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 AC007191.1-201ENST00000623179 2995 ntBASIC14.05□□□□□ -0.16
RAB3BP20337 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 LINC00552-201ENST00000625151 2579 ntBASIC14.05□□□□□ -0.16
RAB3BP20337 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms