Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.59□□□□□ -0.07
CD53P19397 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD53P19397 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CD53P19397 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CD53P19397 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD53P19397 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD53P19397 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD53P19397 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD53P19397 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD53P19397 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.58□□□□□ -0.07
CD53P19397 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.58□□□□□ -0.07
CD53P19397 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CD53P19397 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD53P19397 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD53P19397 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.58□□□□□ -0.08
CD53P19397 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.58□□□□□ -0.08
CD53P19397 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.58□□□□□ -0.08
CD53P19397 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 SLC25A6P2-201ENST00000497974 877 ntBASIC14.58□□□□□ -0.08
CD53P19397 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.58□□□□□ -0.08
CD53P19397 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.58□□□□□ -0.08
CD53P19397 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 AC129492.6-201ENST00000611383 1305 ntBASIC14.58□□□□□ -0.08
CD53P19397 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.58□□□□□ -0.08
CD53P19397 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD53P19397 TMBIM7P-203ENST00000641617 1718 ntBASIC14.58□□□□□ -0.08
CD53P19397 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.58□□□□□ -0.08
CD53P19397 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD53P19397 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 DBET-201ENST00000630918 3363 ntBASIC14.57□□□□□ -0.08
CD53P19397 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 AL592424.1-201ENST00000563624 1536 ntBASIC14.57□□□□□ -0.08
CD53P19397 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 AC015922.1-201ENST00000421102 1152 ntBASIC14.57□□□□□ -0.08
CD53P19397 AC140658.5-201ENST00000438532 169 ntBASIC14.57□□□□□ -0.08
CD53P19397 AL592309.1-201ENST00000443127 649 ntBASIC14.57□□□□□ -0.08
CD53P19397 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.57□□□□□ -0.08
CD53P19397 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 AC069335.1-201ENST00000489972 472 ntBASIC14.57□□□□□ -0.08
CD53P19397 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.57□□□□□ -0.08
CD53P19397 AC051619.7-201ENST00000568314 623 ntBASIC14.57□□□□□ -0.08
CD53P19397 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CD53P19397 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.57□□□□□ -0.08
CD53P19397 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD53P19397 AC131009.4-201ENST00000624048 1740 ntBASIC14.57□□□□□ -0.08
CD53P19397 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms