Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN1P18031 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN1P18031 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN1P18031 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN1P18031 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN1P18031 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN1P18031 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTPN1P18031 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTPN1P18031 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN1P18031 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 AC074338.1-201ENST00000416825 156 ntBASIC16.87■□□□□ 0.29
PTPN1P18031 AC136604.1-201ENST00000418535 575 ntBASIC16.87■□□□□ 0.29
PTPN1P18031 DOC2GP-202ENST00000514950 1163 ntBASIC16.87■□□□□ 0.29
PTPN1P18031 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN1P18031 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN1P18031 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.87■□□□□ 0.29
PTPN1P18031 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PTPN1P18031 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 AC097359.3-201ENST00000603982 1210 ntBASIC16.87■□□□□ 0.29
PTPN1P18031 AC004790.1-201ENST00000612686 536 ntBASIC16.87■□□□□ 0.29
PTPN1P18031 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PTPN1P18031 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN1P18031 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PTPN1P18031 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN1P18031 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.86■□□□□ 0.29
PTPN1P18031 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN1P18031 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
PTPN1P18031 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PTPN1P18031 SPDYE19P-201ENST00000338590 713 ntBASIC16.86■□□□□ 0.29
PTPN1P18031 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN1P18031 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN1P18031 AL589987.1-201ENST00000453380 819 ntBASIC16.86■□□□□ 0.29
PTPN1P18031 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 TIMM17BP1-201ENST00000545713 516 ntBASIC16.86■□□□□ 0.29
PTPN1P18031 LINC01115-203ENST00000606068 577 ntBASIC16.86■□□□□ 0.29
PTPN1P18031 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN1P18031 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN1P18031 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN1P18031 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN1P18031 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN1P18031 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN1P18031 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTPN1P18031 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PTPN1P18031 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN1P18031 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PTPN1P18031 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN1P18031 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN1P18031 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN1P18031 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms