Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 AC090616.6-203ENST00000579186 1945 ntBASIC16.55■□□□□ 0.24
CD48P09326 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.55■□□□□ 0.24
CD48P09326 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CD48P09326 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 AC023141.5-201ENST00000458585 616 ntBASIC16.55■□□□□ 0.24
CD48P09326 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 AC027612.4-201ENST00000605371 583 ntBASIC16.55■□□□□ 0.24
CD48P09326 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD48P09326 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD48P09326 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
CD48P09326 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 AC022532.1-201ENST00000624563 1728 ntBASIC16.54■□□□□ 0.24
CD48P09326 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CD48P09326 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.54■□□□□ 0.24
CD48P09326 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.54■□□□□ 0.24
CD48P09326 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
CD48P09326 EEF1DP4-201ENST00000446006 880 ntBASIC16.54■□□□□ 0.24
CD48P09326 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.54■□□□□ 0.24
CD48P09326 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.54■□□□□ 0.24
CD48P09326 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.54■□□□□ 0.24
CD48P09326 AL596442.2-201ENST00000610240 980 ntBASIC16.54■□□□□ 0.24
CD48P09326 AC003101.2-201ENST00000612557 442 ntBASIC16.54■□□□□ 0.24
CD48P09326 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CD48P09326 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CD48P09326 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.53■□□□□ 0.24
CD48P09326 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 AP002414.2-201ENST00000591780 3365 ntBASIC16.53■□□□□ 0.24
CD48P09326 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CD48P09326 CNN2P11-201ENST00000429351 262 ntBASIC16.53■□□□□ 0.24
CD48P09326 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 AP006288.1-201ENST00000446065 395 ntBASIC16.53■□□□□ 0.24
CD48P09326 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.53■□□□□ 0.24
CD48P09326 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 AC026979.3-201ENST00000607315 403 ntBASIC16.53■□□□□ 0.24
CD48P09326 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CD48P09326 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.53■□□□□ 0.24
CD48P09326 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms