Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 RPL13AP23-201ENST00000480739 586 ntBASIC14.44□□□□□ -0.1
HLA-DPB1P04440 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 AL353732.1-201ENST00000569618 1459 ntBASIC14.44□□□□□ -0.1
HLA-DPB1P04440 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DPB1P04440 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.43□□□□□ -0.1
HLA-DPB1P04440 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 AC087641.1-201ENST00000557561 1021 ntBASIC14.43□□□□□ -0.1
HLA-DPB1P04440 OR7E47P-204ENST00000575924 449 ntBASIC14.43□□□□□ -0.1
HLA-DPB1P04440 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 Z83851.2-201ENST00000609564 659 ntBASIC14.43□□□□□ -0.1
HLA-DPB1P04440 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 AC007326.2-201ENST00000624224 7579 ntBASIC14.43□□□□□ -0.1
HLA-DPB1P04440 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CICP24-201ENST00000605464 2705 ntBASIC14.43□□□□□ -0.1
HLA-DPB1P04440 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DPB1P04440 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SLC22A20-204ENST00000530038 1673 ntBASIC14.42□□□□□ -0.1
HLA-DPB1P04440 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms