Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15□□□□□ -0.01
PDGFAP04085 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15□□□□□ -0.01
PDGFAP04085 AC114501.2-201ENST00000439631 535 ntBASIC15□□□□□ -0.01
PDGFAP04085 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 AC011495.1-201ENST00000498085 584 ntBASIC15□□□□□ -0.01
PDGFAP04085 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15□□□□□ -0.01
PDGFAP04085 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDGFAP04085 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFAP04085 PC-204ENST00000524491 1714 ntTSL 2 BASIC15□□□□□ -0.01
PDGFAP04085 LINC02012-201ENST00000608206 1725 ntBASIC15□□□□□ -0.01
PDGFAP04085 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PDGFAP04085 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDGFAP04085 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.99□□□□□ -0.01
PDGFAP04085 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.99□□□□□ -0.01
PDGFAP04085 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFAP04085 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PDGFAP04085 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFAP04085 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 AL589987.1-201ENST00000453380 819 ntBASIC14.99□□□□□ -0.01
PDGFAP04085 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFAP04085 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 RN7SL837P-201ENST00000463010 287 ntBASIC14.99□□□□□ -0.01
PDGFAP04085 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFAP04085 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.99□□□□□ -0.01
PDGFAP04085 RAB43P1-201ENST00000561790 589 ntBASIC14.99□□□□□ -0.01
PDGFAP04085 AC013467.2-201ENST00000605472 835 ntBASIC14.99□□□□□ -0.01
PDGFAP04085 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.99□□□□□ -0.01
PDGFAP04085 MIR6805-201ENST00000615055 62 ntBASIC14.99□□□□□ -0.01
PDGFAP04085 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PDGFAP04085 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PDGFAP04085 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.99□□□□□ -0.01
PDGFAP04085 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.99□□□□□ -0.01
PDGFAP04085 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PDGFAP04085 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PDGFAP04085 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 PAUPAR-201ENST00000630360 2965 ntBASIC14.98□□□□□ -0.01
PDGFAP04085 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms