Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBC1P01850 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBC1P01850 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBC1P01850 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRBC1P01850 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.98■□□□□ 0.15
TRBC1P01850 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.98■□□□□ 0.15
TRBC1P01850 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 HNRNPUP1-201ENST00000554987 333 ntBASIC15.98■□□□□ 0.15
TRBC1P01850 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 AC025048.3-201ENST00000590609 569 ntBASIC15.98■□□□□ 0.15
TRBC1P01850 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 AC022144.1-201ENST00000602255 1580 ntBASIC15.98■□□□□ 0.15
TRBC1P01850 AC005702.4-201ENST00000618393 416 ntBASIC15.98■□□□□ 0.15
TRBC1P01850 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBC1P01850 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBC1P01850 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBC1P01850 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.97■□□□□ 0.15
TRBC1P01850 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRBC1P01850 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 HMGN1P19-201ENST00000436976 333 ntBASIC15.97■□□□□ 0.15
TRBC1P01850 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRBC1P01850 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 INGX-202ENST00000489074 768 ntBASIC15.97■□□□□ 0.15
TRBC1P01850 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.97■□□□□ 0.15
TRBC1P01850 SPCS2P1-201ENST00000561636 679 ntBASIC15.97■□□□□ 0.15
TRBC1P01850 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.97■□□□□ 0.15
TRBC1P01850 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.97■□□□□ 0.15
TRBC1P01850 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRBC1P01850 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBC1P01850 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRBC1P01850 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBC1P01850 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBC1P01850 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.96■□□□□ 0.15
TRBC1P01850 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBC1P01850 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBC1P01850 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRBC1P01850 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRBC1P01850 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBC1P01850 AC008741.2-201ENST00000612792 3115 ntBASIC15.96■□□□□ 0.15
TRBC1P01850 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms