Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 MIR661-201ENST00000384842 89 ntBASIC14.25□□□□□ -0.13
CNOT4O95628 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CNOT4O95628 TREML5P-201ENST00000421694 576 ntBASIC14.25□□□□□ -0.13
CNOT4O95628 UGT1A2P-201ENST00000454886 866 ntBASIC14.25□□□□□ -0.13
CNOT4O95628 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT4O95628 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.25□□□□□ -0.13
CNOT4O95628 BANF1P1-201ENST00000553684 263 ntBASIC14.25□□□□□ -0.13
CNOT4O95628 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.25□□□□□ -0.13
CNOT4O95628 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 AL589739.1-201ENST00000607720 493 ntBASIC14.25□□□□□ -0.13
CNOT4O95628 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CNOT4O95628 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CNOT4O95628 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.25□□□□□ -0.13
CNOT4O95628 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CNOT4O95628 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CNOT4O95628 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.24□□□□□ -0.13
CNOT4O95628 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 AC092580.3-201ENST00000430932 139 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 GAPDHP21-201ENST00000450301 1010 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 SERBP1P3-201ENST00000459980 809 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 AC027369.6-201ENST00000525520 931 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 AL079307.3-201ENST00000556114 283 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 REXO1L8P-201ENST00000604378 1897 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 AL162727.3-201ENST00000635661 2787 ntBASIC14.24□□□□□ -0.13
CNOT4O95628 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.24□□□□□ -0.13
CNOT4O95628 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CNOT4O95628 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.24□□□□□ -0.13
CNOT4O95628 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms