Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFS3O75489 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFS3O75489 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFS3O75489 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFS3O75489 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFS3O75489 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFS3O75489 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFS3O75489 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.97■□□□□ 0.15
NDUFS3O75489 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.96■□□□□ 0.15
NDUFS3O75489 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 BNIP3P1-202ENST00000550043 1585 ntBASIC15.96■□□□□ 0.15
NDUFS3O75489 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.96■□□□□ 0.15
NDUFS3O75489 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NDUFS3O75489 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 RPS8P6-201ENST00000426177 609 ntBASIC15.96■□□□□ 0.15
NDUFS3O75489 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 FAM58DP-201ENST00000428076 619 ntBASIC15.96■□□□□ 0.15
NDUFS3O75489 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.96■□□□□ 0.15
NDUFS3O75489 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.96■□□□□ 0.15
NDUFS3O75489 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
NDUFS3O75489 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.96■□□□□ 0.15
NDUFS3O75489 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
NDUFS3O75489 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.96■□□□□ 0.15
NDUFS3O75489 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
NDUFS3O75489 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.96■□□□□ 0.15
NDUFS3O75489 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFS3O75489 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
NDUFS3O75489 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFS3O75489 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFS3O75489 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFS3O75489 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFS3O75489 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
NDUFS3O75489 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFS3O75489 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 AL162727.3-201ENST00000635661 2787 ntBASIC15.95■□□□□ 0.14
NDUFS3O75489 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 RBPMS2P1-201ENST00000437762 623 ntBASIC15.95■□□□□ 0.14
NDUFS3O75489 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
NDUFS3O75489 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.95■□□□□ 0.14
NDUFS3O75489 AC093520.2-201ENST00000561830 333 ntBASIC15.95■□□□□ 0.14
NDUFS3O75489 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.95■□□□□ 0.14
NDUFS3O75489 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.95■□□□□ 0.14
NDUFS3O75489 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
NDUFS3O75489 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFS3O75489 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFS3O75489 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFS3O75489 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFS3O75489 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.94■□□□□ 0.14
NDUFS3O75489 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFS3O75489 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms