Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM3O75382 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRIM3O75382 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM3O75382 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 CNN2P2-201ENST00000443536 909 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 CNN2P3-201ENST00000450201 906 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 AC098859.1-201ENST00000502915 1238 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 AC106028.4-201ENST00000614509 607 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 AL136317.3-201ENST00000618497 906 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.97□□□□□ -0.01
TRIM3O75382 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 ALOX12P2-203ENST00000570921 1945 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 MTHFR-217ENST00000641820 1569 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.97□□□□□ -0.01
TRIM3O75382 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 PCGF3-213ENST00000620529 1899 ntBASIC14.97□□□□□ -0.01
TRIM3O75382 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.97□□□□□ -0.01
TRIM3O75382 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRIM3O75382 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 DBET-201ENST00000630918 3363 ntBASIC14.96□□□□□ -0.01
TRIM3O75382 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRIM3O75382 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM3O75382 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 SPDYE7P-202ENST00000420373 878 ntBASIC14.96□□□□□ -0.01
TRIM3O75382 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM3O75382 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM3O75382 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 AC067863.1-201ENST00000494933 530 ntBASIC14.96□□□□□ -0.01
TRIM3O75382 RARRES2P9-201ENST00000565168 469 ntBASIC14.96□□□□□ -0.01
TRIM3O75382 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 AL355385.1-201ENST00000606123 409 ntBASIC14.96□□□□□ -0.01
TRIM3O75382 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.96□□□□□ -0.01
TRIM3O75382 AP3S2-216ENST00000617003 1561 ntBASIC14.96□□□□□ -0.01
TRIM3O75382 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.96□□□□□ -0.01
TRIM3O75382 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.96□□□□□ -0.01
TRIM3O75382 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRIM3O75382 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM3O75382 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM3O75382 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM3O75382 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM3O75382 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM3O75382 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM3O75382 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRIM3O75382 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRIM3O75382 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.96□□□□□ -0.02
TRIM3O75382 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TRIM3O75382 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM3O75382 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM3O75382 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM3O75382 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.95□□□□□ -0.02
TRIM3O75382 AC022532.1-201ENST00000624563 1728 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 LINC01144-201ENST00000626198 1710 ntBASIC14.95□□□□□ -0.02
TRIM3O75382 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.95□□□□□ -0.02
TRIM3O75382 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRIM3O75382 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms