Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSSCA1O60232 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.1□□□□□ -0.31
SSSCA1O60232 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
SSSCA1O60232 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSSCA1O60232 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.1□□□□□ -0.31
SSSCA1O60232 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSSCA1O60232 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSSCA1O60232 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 AC011477.6-201ENST00000604980 1927 ntBASIC13.09□□□□□ -0.31
SSSCA1O60232 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SSSCA1O60232 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.09□□□□□ -0.31
SSSCA1O60232 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.09□□□□□ -0.31
SSSCA1O60232 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.09□□□□□ -0.31
SSSCA1O60232 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSSCA1O60232 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SSSCA1O60232 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.09□□□□□ -0.31
SSSCA1O60232 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.08□□□□□ -0.31
SSSCA1O60232 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SSSCA1O60232 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.08□□□□□ -0.31
SSSCA1O60232 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SSSCA1O60232 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SSSCA1O60232 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms