Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SLC28A2O43868 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC28A2O43868 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC28A2O43868 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.46■□□□□ 0.07
SLC28A2O43868 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC28A2O43868 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.46■□□□□ 0.07
SLC28A2O43868 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC28A2O43868 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SLC28A2O43868 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC28A2O43868 AC140912.1-201ENST00000577171 1054 ntBASIC15.46■□□□□ 0.07
SLC28A2O43868 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC28A2O43868 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC28A2O43868 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 AL162274.1-201ENST00000617191 1098 ntBASIC15.46■□□□□ 0.07
SLC28A2O43868 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
SLC28A2O43868 AL590560.3-201ENST00000623350 461 ntBASIC15.46■□□□□ 0.07
SLC28A2O43868 AC068587.10-201ENST00000641210 219 ntBASIC15.46■□□□□ 0.07
SLC28A2O43868 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC28A2O43868 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC28A2O43868 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A2O43868 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
SLC28A2O43868 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SLC28A2O43868 AC126755.1-201ENST00000525846 6405 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 TSPY26P-202ENST00000565928 3884 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC28A2O43868 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC28A2O43868 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC28A2O43868 MST1L-201ENST00000442552 2185 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 AC012569.1-201ENST00000591191 1524 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC28A2O43868 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC28A2O43868 INE1-201ENST00000456273 945 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 ALG1L8P-201ENST00000533887 760 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 RAB43P1-201ENST00000561790 589 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 AC020765.3-201ENST00000613051 740 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 PAUPAR-201ENST00000630360 2965 ntBASIC15.45■□□□□ 0.06
SLC28A2O43868 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC28A2O43868 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC28A2O43868 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC28A2O43868 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC28A2O43868 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SLC28A2O43868 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC28A2O43868 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC28A2O43868 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC28A2O43868 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC28A2O43868 AL365203.3-201ENST00000609742 2057 ntBASIC15.44■□□□□ 0.06
SLC28A2O43868 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC28A2O43868 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.44■□□□□ 0.06
SLC28A2O43868 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SLC28A2O43868 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC28A2O43868 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.44■□□□□ 0.06
SLC28A2O43868 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.44■□□□□ 0.06
SLC28A2O43868 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SLC28A2O43868 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms