Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC112693.3-201ENST00000624819 1983 ntBASIC17.92■□□□□ 0.46
ACTN4O43707 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ACTN4O43707 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.92■□□□□ 0.46
ACTN4O43707 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.92■□□□□ 0.46
ACTN4O43707 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.92■□□□□ 0.46
ACTN4O43707 AL592309.1-201ENST00000443127 649 ntBASIC17.92■□□□□ 0.46
ACTN4O43707 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.92■□□□□ 0.46
ACTN4O43707 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.92■□□□□ 0.46
ACTN4O43707 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.92■□□□□ 0.46
ACTN4O43707 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.92■□□□□ 0.46
ACTN4O43707 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.92■□□□□ 0.46
ACTN4O43707 MTDHP5-201ENST00000598980 586 ntBASIC17.92■□□□□ 0.46
ACTN4O43707 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.92■□□□□ 0.46
ACTN4O43707 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 AC138035.3-201ENST00000622706 2791 ntBASIC17.92■□□□□ 0.46
ACTN4O43707 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
ACTN4O43707 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ACTN4O43707 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 UXT-AS1-201ENST00000590504 1525 ntBASIC17.92■□□□□ 0.46
ACTN4O43707 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 ELL2P1-201ENST00000413990 1906 ntBASIC17.92■□□□□ 0.46
ACTN4O43707 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ACTN4O43707 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ACTN4O43707 AP000347.1-202ENST00000435868 847 ntBASIC17.91■□□□□ 0.46
ACTN4O43707 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.91■□□□□ 0.46
ACTN4O43707 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.91■□□□□ 0.46
ACTN4O43707 AC022145.2-201ENST00000598203 171 ntBASIC17.91■□□□□ 0.46
ACTN4O43707 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.91■□□□□ 0.46
ACTN4O43707 AC105339.1-204ENST00000636249 355 ntBASIC17.91■□□□□ 0.46
ACTN4O43707 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.91■□□□□ 0.46
ACTN4O43707 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ACTN4O43707 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 PKD1P5-201ENST00000532415 10291 ntBASIC17.91■□□□□ 0.46
ACTN4O43707 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ACTN4O43707 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.91■□□□□ 0.46
ACTN4O43707 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ACTN4O43707 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.91■□□□□ 0.46
ACTN4O43707 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ACTN4O43707 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.91■□□□□ 0.46
ACTN4O43707 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
ACTN4O43707 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ACTN4O43707 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 KRT8P37-201ENST00000451609 1420 ntBASIC17.9■□□□□ 0.46
ACTN4O43707 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
ACTN4O43707 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ACTN4O43707 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ACTN4O43707 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.9■□□□□ 0.46
ACTN4O43707 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.9■□□□□ 0.46
ACTN4O43707 AL139010.1-201ENST00000454878 894 ntBASIC17.9■□□□□ 0.46
ACTN4O43707 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.9■□□□□ 0.46
ACTN4O43707 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.9■□□□□ 0.46
ACTN4O43707 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 RARRES2P9-201ENST00000565168 469 ntBASIC17.9■□□□□ 0.46
ACTN4O43707 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.9■□□□□ 0.46
ACTN4O43707 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.9■□□□□ 0.46
ACTN4O43707 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.9■□□□□ 0.46
ACTN4O43707 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ACTN4O43707 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms