Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC008761.3-201ENST00000624803 892 ntBASIC17.95■□□□□ 0.46
CHMP2AO43633 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CHMP2AO43633 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 AC008741.2-201ENST00000612792 3115 ntBASIC17.95■□□□□ 0.46
CHMP2AO43633 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.95■□□□□ 0.46
CHMP2AO43633 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.95■□□□□ 0.46
CHMP2AO43633 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 AC069224.1-201ENST00000566372 1715 ntBASIC17.95■□□□□ 0.46
CHMP2AO43633 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.95■□□□□ 0.46
CHMP2AO43633 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHMP2AO43633 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 FO393414.2-201ENST00000405153 598 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 EEF1DP4-201ENST00000446006 880 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP2AO43633 TERF1P3-201ENST00000505638 1227 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP2AO43633 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP2AO43633 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.94■□□□□ 0.46
CHMP2AO43633 AC025048.3-201ENST00000590609 569 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CHMP2AO43633 AC005702.4-201ENST00000618393 416 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 PCDHA1-201ENST00000378133 2726 ntBASIC17.94■□□□□ 0.46
CHMP2AO43633 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHMP2AO43633 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHMP2AO43633 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CHMP2AO43633 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 AL391005.1-201ENST00000623953 2435 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHMP2AO43633 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHMP2AO43633 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP2AO43633 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.93■□□□□ 0.46
CHMP2AO43633 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.93■□□□□ 0.46
CHMP2AO43633 SDHAP3-202ENST00000515467 728 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP2AO43633 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CHMP2AO43633 AC138761.1-201ENST00000584393 385 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.93■□□□□ 0.46
CHMP2AO43633 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.93■□□□□ 0.46
CHMP2AO43633 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms