Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SMAD6O43541 AC025048.6-201ENST00000634326 1161 ntBASIC16.07■□□□□ 0.16
SMAD6O43541 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SMAD6O43541 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.07■□□□□ 0.16
SMAD6O43541 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD6O43541 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SMAD6O43541 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
SMAD6O43541 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SMAD6O43541 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SMAD6O43541 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.06■□□□□ 0.16
SMAD6O43541 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.06■□□□□ 0.16
SMAD6O43541 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
SMAD6O43541 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SMAD6O43541 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.06■□□□□ 0.16
SMAD6O43541 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.06■□□□□ 0.16
SMAD6O43541 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.06■□□□□ 0.16
SMAD6O43541 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SMAD6O43541 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SMAD6O43541 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMAD6O43541 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SMAD6O43541 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.05■□□□□ 0.16
SMAD6O43541 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMAD6O43541 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.05■□□□□ 0.16
SMAD6O43541 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.05■□□□□ 0.16
SMAD6O43541 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.05■□□□□ 0.16
SMAD6O43541 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SMAD6O43541 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMAD6O43541 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMAD6O43541 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
SMAD6O43541 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMAD6O43541 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMAD6O43541 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms