Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 MROH4P-201ENST00000431302 1578 ntBASIC16.25■□□□□ 0.19
RIPK2O43353 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.25■□□□□ 0.19
RIPK2O43353 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
RIPK2O43353 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RIPK2O43353 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 AC007686.3-201ENST00000619017 3487 ntBASIC16.24■□□□□ 0.19
RIPK2O43353 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.24■□□□□ 0.19
RIPK2O43353 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RIPK2O43353 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RIPK2O43353 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 AC148477.4-201ENST00000613430 1793 ntBASIC16.24■□□□□ 0.19
RIPK2O43353 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.24■□□□□ 0.19
RIPK2O43353 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.24■□□□□ 0.19
RIPK2O43353 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.24■□□□□ 0.19
RIPK2O43353 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.24■□□□□ 0.19
RIPK2O43353 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.24■□□□□ 0.19
RIPK2O43353 AC012640.2-201ENST00000561606 901 ntBASIC16.24■□□□□ 0.19
RIPK2O43353 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RIPK2O43353 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.24■□□□□ 0.19
RIPK2O43353 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.24■□□□□ 0.19
RIPK2O43353 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
RIPK2O43353 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.24■□□□□ 0.19
RIPK2O43353 AC023024.2-201ENST00000623561 1993 ntBASIC16.24■□□□□ 0.19
RIPK2O43353 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 AC005912.2-201ENST00000619492 2400 ntBASIC16.24■□□□□ 0.19
RIPK2O43353 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RIPK2O43353 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RIPK2O43353 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.23■□□□□ 0.19
RIPK2O43353 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 PRSS29P-201ENST00000440800 595 ntBASIC16.23■□□□□ 0.19
RIPK2O43353 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.23■□□□□ 0.19
RIPK2O43353 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 RNPS1P1-201ENST00000507437 918 ntBASIC16.23■□□□□ 0.19
RIPK2O43353 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.23■□□□□ 0.19
RIPK2O43353 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 AC067930.6-201ENST00000623257 4947 ntBASIC16.23■□□□□ 0.19
RIPK2O43353 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RIPK2O43353 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RIPK2O43353 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RIPK2O43353 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RIPK2O43353 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
RIPK2O43353 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms