Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
NDUFS4O43181 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 MIR943-201ENST00000401286 94 ntBASIC15.3■□□□□ 0.04
NDUFS4O43181 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.3■□□□□ 0.04
NDUFS4O43181 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 KRT8P37-201ENST00000451609 1420 ntBASIC15.3■□□□□ 0.04
NDUFS4O43181 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NDUFS4O43181 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.3■□□□□ 0.04
NDUFS4O43181 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 RFPL4AP1-201ENST00000530883 850 ntBASIC15.3■□□□□ 0.04
NDUFS4O43181 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 AL079307.3-201ENST00000556114 283 ntBASIC15.3■□□□□ 0.04
NDUFS4O43181 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 AC093512.1-201ENST00000617969 520 ntBASIC15.3■□□□□ 0.04
NDUFS4O43181 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS4O43181 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS4O43181 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.3■□□□□ 0.04
NDUFS4O43181 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NDUFS4O43181 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NDUFS4O43181 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NDUFS4O43181 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 REXO1L1P-202ENST00000608646 1974 ntBASIC15.29■□□□□ 0.04
NDUFS4O43181 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 FO538757.1-201ENST00000623083 1397 ntBASIC15.29■□□□□ 0.04
NDUFS4O43181 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFS4O43181 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDUFS4O43181 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDUFS4O43181 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NDUFS4O43181 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.29■□□□□ 0.04
NDUFS4O43181 TREML5P-201ENST00000421694 576 ntBASIC15.29■□□□□ 0.04
NDUFS4O43181 IGHV3-42-201ENST00000520410 361 ntBASIC15.29■□□□□ 0.04
NDUFS4O43181 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFS4O43181 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 DUX4L27-201ENST00000554796 1261 ntBASIC15.29■□□□□ 0.04
NDUFS4O43181 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFS4O43181 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFS4O43181 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.29■□□□□ 0.04
NDUFS4O43181 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 AC073592.8-201ENST00000624126 511 ntBASIC15.29■□□□□ 0.04
NDUFS4O43181 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFS4O43181 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.29■□□□□ 0.04
NDUFS4O43181 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFS4O43181 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFS4O43181 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFS4O43181 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NDUFS4O43181 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NDUFS4O43181 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFS4O43181 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFS4O43181 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFS4O43181 AC132872.4-202ENST00000622924 2756 ntBASIC15.28■□□□□ 0.04
NDUFS4O43181 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFS4O43181 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms