Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA3EO15041 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.08■□□□□ 0.65
SEMA3EO15041 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SEMA3EO15041 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SEMA3EO15041 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.08■□□□□ 0.65
SEMA3EO15041 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.08■□□□□ 0.64
SEMA3EO15041 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.08■□□□□ 0.64
SEMA3EO15041 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.08■□□□□ 0.64
SEMA3EO15041 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.08■□□□□ 0.64
SEMA3EO15041 CU634019.7-201ENST00000624153 1185 ntBASIC19.08■□□□□ 0.64
SEMA3EO15041 FP236241.2-201ENST00000624906 1185 ntBASIC19.08■□□□□ 0.64
SEMA3EO15041 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.08■□□□□ 0.64
SEMA3EO15041 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.08■□□□□ 0.64
SEMA3EO15041 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SEMA3EO15041 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.08■□□□□ 0.64
SEMA3EO15041 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.08■□□□□ 0.64
SEMA3EO15041 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
SEMA3EO15041 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SEMA3EO15041 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SEMA3EO15041 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.07■□□□□ 0.64
SEMA3EO15041 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SEMA3EO15041 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.07■□□□□ 0.64
SEMA3EO15041 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 SOCS2P1-201ENST00000417727 557 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 TMEM14DP-201ENST00000422205 345 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 ACTG1P3-201ENST00000431775 1114 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.07■□□□□ 0.64
SEMA3EO15041 ACA64.2-201ENST00000459014 129 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 IGHV3-71-201ENST00000523324 359 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 KRT17P8-201ENST00000540749 863 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 HILS1-202ENST00000545329 423 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 AC120045.2-201ENST00000567334 178 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 AC008735.3-201ENST00000596646 500 ntBASIC19.07■□□□□ 0.64
SEMA3EO15041 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.07■□□□□ 0.64
SEMA3EO15041 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.07■□□□□ 0.64
SEMA3EO15041 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEMA3EO15041 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SEMA3EO15041 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SEMA3EO15041 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SEMA3EO15041 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SEMA3EO15041 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.06■□□□□ 0.64
SEMA3EO15041 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SEMA3EO15041 CYP2T1P-202ENST00000641596 2535 ntBASIC19.06■□□□□ 0.64
SEMA3EO15041 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 AC006449.5-201ENST00000610658 2098 ntBASIC19.06■□□□□ 0.64
SEMA3EO15041 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SEMA3EO15041 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.06■□□□□ 0.64
SEMA3EO15041 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.06■□□□□ 0.64
SEMA3EO15041 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SEMA3EO15041 AC112492.5-201ENST00000421897 457 ntBASIC19.06■□□□□ 0.64
SEMA3EO15041 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.06■□□□□ 0.64
SEMA3EO15041 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.06■□□□□ 0.64
SEMA3EO15041 RAB43P1-201ENST00000561790 589 ntBASIC19.06■□□□□ 0.64
SEMA3EO15041 AC015910.1-201ENST00000579400 975 ntBASIC19.06■□□□□ 0.64
SEMA3EO15041 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEMA3EO15041 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms