Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.22■□□□□ 0.03
CASQ2O14958 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 AC140479.7-201ENST00000636301 2332 ntBASIC15.22■□□□□ 0.03
CASQ2O14958 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.22■□□□□ 0.03
CASQ2O14958 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 SPDYE21P-201ENST00000413323 827 ntBASIC15.22■□□□□ 0.03
CASQ2O14958 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.22■□□□□ 0.03
CASQ2O14958 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 MIR4651-201ENST00000582622 73 ntBASIC15.22■□□□□ 0.03
CASQ2O14958 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.22■□□□□ 0.03
CASQ2O14958 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CASQ2O14958 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CASQ2O14958 AC005252.3-201ENST00000623855 2258 ntBASIC15.22■□□□□ 0.03
CASQ2O14958 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CASQ2O14958 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.22■□□□□ 0.03
CASQ2O14958 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 BEND3P1-201ENST00000421591 1944 ntBASIC15.21■□□□□ 0.03
CASQ2O14958 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CASQ2O14958 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 HAUS4P1-201ENST00000406739 1145 ntBASIC15.21■□□□□ 0.03
CASQ2O14958 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.21■□□□□ 0.03
CASQ2O14958 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.21■□□□□ 0.03
CASQ2O14958 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.21■□□□□ 0.03
CASQ2O14958 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 AL592071.1-201ENST00000611956 408 ntBASIC15.21■□□□□ 0.03
CASQ2O14958 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 REXO1L3P-201ENST00000622202 1288 ntBASIC15.21■□□□□ 0.03
CASQ2O14958 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.21■□□□□ 0.03
CASQ2O14958 AL031432.5-201ENST00000641059 760 ntBASIC15.21■□□□□ 0.03
CASQ2O14958 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 DMBT1P1-203ENST00000636837 4628 ntBASIC15.21■□□□□ 0.03
CASQ2O14958 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.21■□□□□ 0.03
CASQ2O14958 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CASQ2O14958 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms