Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CHD1O14646 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 RPL7P35-201ENST00000446943 740 ntBASIC25.06■■□□□ 1.6
CHD1O14646 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD1O14646 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD1O14646 AC073911.3-201ENST00000624401 631 ntBASIC25.06■■□□□ 1.6
CHD1O14646 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC25.06■■□□□ 1.6
CHD1O14646 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC25.05■■□□□ 1.6
CHD1O14646 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC25.05■■□□□ 1.6
CHD1O14646 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 RN7SKP175-201ENST00000408472 289 ntBASIC25.05■■□□□ 1.6
CHD1O14646 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC25.05■■□□□ 1.6
CHD1O14646 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC25.05■■□□□ 1.6
CHD1O14646 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC25.05■■□□□ 1.6
CHD1O14646 AL031713.1-201ENST00000564813 661 ntBASIC25.05■■□□□ 1.6
CHD1O14646 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC25.05■■□□□ 1.6
CHD1O14646 AC138466.3-201ENST00000619983 221 ntBASIC25.05■■□□□ 1.6
CHD1O14646 AL132780.4-201ENST00000624870 1135 ntBASIC25.05■■□□□ 1.6
CHD1O14646 NAP1L6-202ENST00000641404 1222 ntBASIC25.05■■□□□ 1.6
CHD1O14646 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CHD1O14646 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CHD1O14646 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD1O14646 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CHD1O14646 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC25.05■■□□□ 1.6
CHD1O14646 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CHD1O14646 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC25.04■■□□□ 1.6
CHD1O14646 VDAC1P1-201ENST00000439229 848 ntBASIC25.04■■□□□ 1.6
CHD1O14646 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 NAT9-211ENST00000580632 799 ntTSL 3 BASIC25.04■■□□□ 1.6
CHD1O14646 AC004466.1-201ENST00000599515 1080 ntBASIC25.04■■□□□ 1.6
CHD1O14646 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC25.04■■□□□ 1.6
CHD1O14646 MIR6858-201ENST00000620733 67 ntBASIC25.04■■□□□ 1.6
CHD1O14646 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
CHD1O14646 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC25.04■■□□□ 1.6
CHD1O14646 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD1O14646 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CHD1O14646 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CHD1O14646 AL512430.1-201ENST00000392575 860 ntBASIC25.03■■□□□ 1.6
CHD1O14646 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC25.03■■□□□ 1.6
CHD1O14646 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC25.03■■□□□ 1.6
CHD1O14646 TUBB8P8-201ENST00000458717 1058 ntBASIC25.03■■□□□ 1.6
CHD1O14646 REEP5-205ENST00000504247 480 ntTSL 5 BASIC25.03■■□□□ 1.6
CHD1O14646 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC25.03■■□□□ 1.6
CHD1O14646 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC25.03■■□□□ 1.6
CHD1O14646 MIR5196-201ENST00000578146 115 ntBASIC25.03■■□□□ 1.6
CHD1O14646 AP001527.2-201ENST00000614441 631 ntBASIC25.03■■□□□ 1.6
CHD1O14646 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CHD1O14646 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC25.03■■□□□ 1.6
CHD1O14646 AC005632.3-201ENST00000605544 308 ntBASIC25.03■■□□□ 1.6
CHD1O14646 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC25.03■■□□□ 1.6
CHD1O14646 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHD1O14646 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC25.03■■□□□ 1.6
CHD1O14646 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC25.03■■□□□ 1.6
CHD1O14646 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1O14646 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1O14646 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1O14646 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1O14646 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC25.02■■□□□ 1.6
CHD1O14646 RN7SL596P-201ENST00000582123 288 ntBASIC25.02■■□□□ 1.6
CHD1O14646 RN7SL163P-201ENST00000583100 276 ntBASIC25.02■■□□□ 1.6
CHD1O14646 RNF146-211ENST00000609447 607 ntTSL 4 BASIC25.02■■□□□ 1.6
CHD1O14646 AC138466.4-201ENST00000623965 852 ntBASIC25.02■■□□□ 1.6
CHD1O14646 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1O14646 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC25.02■■□□□ 1.6
CHD1O14646 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1O14646 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC25.02■■□□□ 1.6
CHD1O14646 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1O14646 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD1O14646 PP12613-201ENST00000424958 2230 ntBASIC25.01■■□□□ 1.59
CHD1O14646 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHD1O14646 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms