Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
DDX39AO00148 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
DDX39AO00148 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
DDX39AO00148 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX39AO00148 AC074044.1-201ENST00000609673 707 ntBASIC17.94■□□□□ 0.46
DDX39AO00148 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDX39AO00148 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX39AO00148 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX39AO00148 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.93■□□□□ 0.46
DDX39AO00148 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DDX39AO00148 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.93■□□□□ 0.46
DDX39AO00148 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DDX39AO00148 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.93■□□□□ 0.46
DDX39AO00148 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
DDX39AO00148 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
DDX39AO00148 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 AL662799.1-202ENST00000614205 422 ntBASIC17.93■□□□□ 0.46
DDX39AO00148 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.93■□□□□ 0.46
DDX39AO00148 AF228730.6-201ENST00000641497 218 ntBASIC17.93■□□□□ 0.46
DDX39AO00148 AC084121.3-201ENST00000641716 218 ntBASIC17.93■□□□□ 0.46
DDX39AO00148 AC105233.6-201ENST00000642093 218 ntBASIC17.93■□□□□ 0.46
DDX39AO00148 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
DDX39AO00148 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DDX39AO00148 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
DDX39AO00148 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
DDX39AO00148 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX39AO00148 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX39AO00148 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.92■□□□□ 0.46
DDX39AO00148 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.92■□□□□ 0.46
DDX39AO00148 AP005018.1-201ENST00000525475 301 ntBASIC17.92■□□□□ 0.46
DDX39AO00148 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 TPRX2P-201ENST00000535362 881 ntBASIC17.92■□□□□ 0.46
DDX39AO00148 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.92■□□□□ 0.46
DDX39AO00148 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 AL450472.2-201ENST00000603663 1156 ntBASIC17.92■□□□□ 0.46
DDX39AO00148 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.92■□□□□ 0.46
DDX39AO00148 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DDX39AO00148 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.92■□□□□ 0.46
DDX39AO00148 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.92■□□□□ 0.46
DDX39AO00148 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms