Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC188H7C350 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC188H7C350 RPS2P28-201ENST00000314255 741 ntBASIC16.64■□□□□ 0.25
CCDC188H7C350 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
CCDC188H7C350 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC188H7C350 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 AC018712.1-201ENST00000455767 687 ntBASIC16.64■□□□□ 0.25
CCDC188H7C350 MIR4751-201ENST00000578027 74 ntBASIC16.64■□□□□ 0.25
CCDC188H7C350 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC188H7C350 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC188H7C350 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC188H7C350 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC188H7C350 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC188H7C350 AC005089.1-201ENST00000619486 2241 ntBASIC16.64■□□□□ 0.25
CCDC188H7C350 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC188H7C350 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CCDC188H7C350 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC188H7C350 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CCDC188H7C350 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC188H7C350 AL645939.2-201ENST00000427340 991 ntBASIC16.63■□□□□ 0.25
CCDC188H7C350 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 KRT18P35-201ENST00000510488 1269 ntBASIC16.63■□□□□ 0.25
CCDC188H7C350 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 MIR4313-201ENST00000580760 101 ntBASIC16.63■□□□□ 0.25
CCDC188H7C350 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC188H7C350 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC188H7C350 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.63■□□□□ 0.25
CCDC188H7C350 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC188H7C350 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC188H7C350 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC188H7C350 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC188H7C350 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC188H7C350 HNRNPDP1-201ENST00000439535 754 ntBASIC16.62■□□□□ 0.25
CCDC188H7C350 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 PRYP6-201ENST00000514804 343 ntBASIC16.62■□□□□ 0.25
CCDC188H7C350 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC188H7C350 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC188H7C350 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC188H7C350 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC188H7C350 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 AC117500.6-201ENST00000624871 588 ntBASIC16.62■□□□□ 0.25
CCDC188H7C350 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC188H7C350 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC188H7C350 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC188H7C350 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.62■□□□□ 0.25
CCDC188H7C350 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms