Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 ELK2BP-201ENST00000415014 1224 ntBASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 MIR3180-1-201ENST00000580374 94 ntBASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 MIR3180-3-201ENST00000584616 94 ntBASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 AC112693.3-201ENST00000624819 1983 ntBASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MEIS3P1A6NDR6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AC104581.4-201ENST00000623126 3052 ntBASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AL732292.2-201ENST00000609649 430 ntBASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AC005089.1-201ENST00000619486 2241 ntBASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MEIS3P1A6NDR6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.75□□□□□ -0.21
MEIS3P1A6NDR6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms