Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 DUX4L27-201ENST00000554796 1261 ntBASIC15.17■□□□□ 0.02
LRIT2A6NDA9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 AL158211.3-201ENST00000607385 239 ntBASIC15.17■□□□□ 0.02
LRIT2A6NDA9 TEX28P1-201ENST00000613479 1221 ntBASIC15.17■□□□□ 0.02
LRIT2A6NDA9 TEX28P2-201ENST00000617764 1221 ntBASIC15.17■□□□□ 0.02
LRIT2A6NDA9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRIT2A6NDA9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC105917.1-201ENST00000506637 2539 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 MIR943-201ENST00000401286 94 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC092580.3-201ENST00000430932 139 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC097493.3-201ENST00000509725 367 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC027369.6-201ENST00000525520 931 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 HNRNPUP1-201ENST00000554987 333 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC097359.3-201ENST00000603982 1210 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 MIR6069-201ENST00000620069 79 ntBASIC15.16■□□□□ 0.02
LRIT2A6NDA9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRIT2A6NDA9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRIT2A6NDA9 AC136604.1-201ENST00000418535 575 ntBASIC15.15■□□□□ 0.02
LRIT2A6NDA9 TREML5P-201ENST00000421694 576 ntBASIC15.15■□□□□ 0.02
LRIT2A6NDA9 PMS2P2-201ENST00000425039 1128 ntBASIC15.15■□□□□ 0.02
LRIT2A6NDA9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms