Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BASP1P1-201ENST00000430708 665 ntBASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GPS2P2-201ENST00000430745 888 ntBASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 INGX-202ENST00000489074 768 ntBASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC005498.2-205ENST00000593218 784 ntBASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BCRP1-201ENST00000444246 691 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC105233.2-201ENST00000523697 349 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AF228730.5-201ENST00000530288 346 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL138918.1-201ENST00000568306 659 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC126177.1-201ENST00000547829 2218 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC069224.1-201ENST00000566372 1715 ntBASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.9□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms