Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.95■□□□□ 0.94
EXOSC1Q9Y3B2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXOSC1Q9Y3B2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.95■□□□□ 0.94
EXOSC1Q9Y3B2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EXOSC1Q9Y3B2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 DUX4L11-201ENST00000611504 1267 ntBASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 DUX4L12-201ENST00000614593 1267 ntBASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 DUX4L14-201ENST00000621227 1267 ntBASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXOSC1Q9Y3B2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXOSC1Q9Y3B2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EXOSC1Q9Y3B2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXOSC1Q9Y3B2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EXOSC1Q9Y3B2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.94
EXOSC1Q9Y3B2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.89■□□□□ 0.94
EXOSC1Q9Y3B2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EXOSC1Q9Y3B2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.89■□□□□ 0.93
EXOSC1Q9Y3B2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.89■□□□□ 0.93
EXOSC1Q9Y3B2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.89■□□□□ 0.93
EXOSC1Q9Y3B2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EXOSC1Q9Y3B2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXOSC1Q9Y3B2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXOSC1Q9Y3B2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EXOSC1Q9Y3B2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
EXOSC1Q9Y3B2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EXOSC1Q9Y3B2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EXOSC1Q9Y3B2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EXOSC1Q9Y3B2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 HLA-L-211ENST00000482052 1765 ntBASIC20.85■□□□□ 0.93
EXOSC1Q9Y3B2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
EXOSC1Q9Y3B2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
EXOSC1Q9Y3B2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXOSC1Q9Y3B2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
EXOSC1Q9Y3B2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms