Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB4Q9UN71 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB4Q9UN71 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHGB4Q9UN71 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB4Q9UN71 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGB4Q9UN71 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB4Q9UN71 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHGB4Q9UN71 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHGB4Q9UN71 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHGB4Q9UN71 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 AC022413.1-201ENST00000624602 984 ntBASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHGB4Q9UN71 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 AC092296.2-201ENST00000589470 999 ntBASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB4Q9UN71 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 LINC00543-201ENST00000567234 1845 ntBASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 ECEL1P2-201ENST00000461596 1295 ntBASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB4Q9UN71 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB4Q9UN71 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB4Q9UN71 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PCDHGB4Q9UN71 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.49■■□□□ 1.19
PCDHGB4Q9UN71 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB4Q9UN71 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB4Q9UN71 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB4Q9UN71 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB4Q9UN71 AP003733.4-201ENST00000623785 1697 ntBASIC22.48■■□□□ 1.19
PCDHGB4Q9UN71 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 LINC01124-201ENST00000409786 2117 ntBASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 RP9P-202ENST00000450133 1212 ntBASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB4Q9UN71 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB4Q9UN71 SLC6A10P-202ENST00000431994 2058 ntBASIC22.45■■□□□ 1.18
PCDHGB4Q9UN71 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB4Q9UN71 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms