Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.47■■□□□ 1.03
PPP4R1LQ9P1A2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.46■■□□□ 1.03
PPP4R1LQ9P1A2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 AC103724.3-201ENST00000564481 992 ntBASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PPP4R1LQ9P1A2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R1LQ9P1A2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R1LQ9P1A2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.44■■□□□ 1.02
PPP4R1LQ9P1A2 THA1P-201ENST00000590384 1145 ntBASIC21.44■■□□□ 1.02
PPP4R1LQ9P1A2 AC020928.2-201ENST00000588717 2197 ntBASIC21.44■■□□□ 1.02
PPP4R1LQ9P1A2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PPP4R1LQ9P1A2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 AL031848.2-201ENST00000607670 837 ntBASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 AC011551.1-201ENST00000614101 683 ntBASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.43■■□□□ 1.02
PPP4R1LQ9P1A2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PPP4R1LQ9P1A2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
PPP4R1LQ9P1A2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.42■■□□□ 1.02
PPP4R1LQ9P1A2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PPP4R1LQ9P1A2 AC120024.1-201ENST00000562672 995 ntBASIC21.42■■□□□ 1.02
PPP4R1LQ9P1A2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.42■■□□□ 1.02
PPP4R1LQ9P1A2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 KRT18P24-201ENST00000344739 1156 ntBASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PPP4R1LQ9P1A2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 AC022211.4-201ENST00000625094 2161 ntBASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 AC090877.2-201ENST00000558441 1738 ntBASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.4■■□□□ 1.02
PPP4R1LQ9P1A2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.39■■□□□ 1.02
PPP4R1LQ9P1A2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PPP4R1LQ9P1A2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.39■■□□□ 1.02
PPP4R1LQ9P1A2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PPP4R1LQ9P1A2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PPP4R1LQ9P1A2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R1LQ9P1A2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP4R1LQ9P1A2 MIR6089-201ENST00000616698 64 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms