Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TFCP2L1Q9NZI6 AL162430.1-201ENST00000480705 870 ntBASIC30.24■■■□□ 2.43
TFCP2L1Q9NZI6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.24■■■□□ 2.43
TFCP2L1Q9NZI6 MIR6722-201ENST00000617286 78 ntBASIC30.24■■■□□ 2.43
TFCP2L1Q9NZI6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TFCP2L1Q9NZI6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
TFCP2L1Q9NZI6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 SNX5-217ENST00000606557 1087 ntBASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 AC087623.3-201ENST00000607047 1098 ntBASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TFCP2L1Q9NZI6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
TFCP2L1Q9NZI6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
TFCP2L1Q9NZI6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
TFCP2L1Q9NZI6 MIR939-201ENST00000401314 82 ntBASIC30.22■■■□□ 2.43
TFCP2L1Q9NZI6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
TFCP2L1Q9NZI6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
TFCP2L1Q9NZI6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
TFCP2L1Q9NZI6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
TFCP2L1Q9NZI6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.2■■■□□ 2.43
TFCP2L1Q9NZI6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
TFCP2L1Q9NZI6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
TFCP2L1Q9NZI6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
TFCP2L1Q9NZI6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.2■■■□□ 2.42
TFCP2L1Q9NZI6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TFCP2L1Q9NZI6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.19■■■□□ 2.42
TFCP2L1Q9NZI6 AC142472.1-201ENST00000612013 1741 ntBASIC30.19■■■□□ 2.42
TFCP2L1Q9NZI6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
TFCP2L1Q9NZI6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 AP001330.3-201ENST00000520123 633 ntBASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.17■■■□□ 2.42
TFCP2L1Q9NZI6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.16■■■□□ 2.42
TFCP2L1Q9NZI6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TFCP2L1Q9NZI6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
TFCP2L1Q9NZI6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.16■■■□□ 2.42
TFCP2L1Q9NZI6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.15■■■□□ 2.42
TFCP2L1Q9NZI6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TFCP2L1Q9NZI6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.15■■■□□ 2.42
TFCP2L1Q9NZI6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
TFCP2L1Q9NZI6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
TFCP2L1Q9NZI6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
TFCP2L1Q9NZI6 DRD5P2-201ENST00000421395 2012 ntBASIC30.14■■■□□ 2.42
TFCP2L1Q9NZI6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
TFCP2L1Q9NZI6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TFCP2L1Q9NZI6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
TFCP2L1Q9NZI6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
TFCP2L1Q9NZI6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.13■■■□□ 2.41
TFCP2L1Q9NZI6 AC091305.1-201ENST00000479476 895 ntBASIC30.13■■■□□ 2.41
TFCP2L1Q9NZI6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TFCP2L1Q9NZI6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
TFCP2L1Q9NZI6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
TFCP2L1Q9NZI6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
TFCP2L1Q9NZI6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.11■■■□□ 2.41
TFCP2L1Q9NZI6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
TFCP2L1Q9NZI6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
TFCP2L1Q9NZI6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.1■■■□□ 2.41
TFCP2L1Q9NZI6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.1■■■□□ 2.41
TFCP2L1Q9NZI6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TFCP2L1Q9NZI6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.09■■■□□ 2.41
TFCP2L1Q9NZI6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
TFCP2L1Q9NZI6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TFCP2L1Q9NZI6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
TFCP2L1Q9NZI6 AC004448.1-201ENST00000458332 883 ntBASIC30.09■■■□□ 2.41
TFCP2L1Q9NZI6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 DUX4L19-201ENST00000557448 1267 ntBASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
TFCP2L1Q9NZI6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
TFCP2L1Q9NZI6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TFCP2L1Q9NZI6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
TFCP2L1Q9NZI6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TFCP2L1Q9NZI6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
TFCP2L1Q9NZI6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 LINC01003-201ENST00000564834 1764 ntBASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
TFCP2L1Q9NZI6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
TFCP2L1Q9NZI6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms