Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
KLHL1Q9NR64 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KLHL1Q9NR64 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KLHL1Q9NR64 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KLHL1Q9NR64 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
KLHL1Q9NR64 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
KLHL1Q9NR64 GUSBP5-201ENST00000418136 578 ntBASIC21.9■■□□□ 1.1
KLHL1Q9NR64 AC239859.2-201ENST00000444165 318 ntBASIC21.9■■□□□ 1.1
KLHL1Q9NR64 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.89■■□□□ 1.09
KLHL1Q9NR64 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KLHL1Q9NR64 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KLHL1Q9NR64 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.88■■□□□ 1.09
KLHL1Q9NR64 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 AC022616.5-201ENST00000518796 181 ntBASIC21.87■■□□□ 1.09
KLHL1Q9NR64 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KLHL1Q9NR64 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.86■■□□□ 1.09
KLHL1Q9NR64 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 AC010501.1-201ENST00000606270 1962 ntBASIC21.85■■□□□ 1.09
KLHL1Q9NR64 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 AC131212.1-201ENST00000613771 668 ntBASIC21.85■■□□□ 1.09
KLHL1Q9NR64 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.85■■□□□ 1.09
KLHL1Q9NR64 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
KLHL1Q9NR64 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL1Q9NR64 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL1Q9NR64 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KLHL1Q9NR64 THA1P-201ENST00000590384 1145 ntBASIC21.83■■□□□ 1.09
KLHL1Q9NR64 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KLHL1Q9NR64 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KLHL1Q9NR64 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KLHL1Q9NR64 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.8■■□□□ 1.08
KLHL1Q9NR64 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms