Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GCM1Q9NP62 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GCM1Q9NP62 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
GCM1Q9NP62 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
GCM1Q9NP62 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
GCM1Q9NP62 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GCM1Q9NP62 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GCM1Q9NP62 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 AC135731.1-201ENST00000569415 2548 ntBASIC19.93■□□□□ 0.78
GCM1Q9NP62 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GCM1Q9NP62 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GCM1Q9NP62 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GCM1Q9NP62 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GCM1Q9NP62 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
GCM1Q9NP62 SLC6A10P-202ENST00000431994 2058 ntBASIC19.93■□□□□ 0.78
GCM1Q9NP62 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GCM1Q9NP62 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GCM1Q9NP62 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.92■□□□□ 0.78
GCM1Q9NP62 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
GCM1Q9NP62 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.92■□□□□ 0.78
GCM1Q9NP62 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
GCM1Q9NP62 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.92■□□□□ 0.78
GCM1Q9NP62 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GCM1Q9NP62 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GCM1Q9NP62 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.91■□□□□ 0.78
GCM1Q9NP62 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GCM1Q9NP62 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GCM1Q9NP62 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GCM1Q9NP62 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GCM1Q9NP62 AC103724.3-201ENST00000564481 992 ntBASIC19.91■□□□□ 0.78
GCM1Q9NP62 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
GCM1Q9NP62 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GCM1Q9NP62 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GCM1Q9NP62 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
GCM1Q9NP62 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.9■□□□□ 0.78
GCM1Q9NP62 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
GCM1Q9NP62 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GCM1Q9NP62 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.9■□□□□ 0.78
GCM1Q9NP62 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GCM1Q9NP62 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GCM1Q9NP62 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GCM1Q9NP62 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GCM1Q9NP62 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.89■□□□□ 0.77
GCM1Q9NP62 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.89■□□□□ 0.77
GCM1Q9NP62 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.89■□□□□ 0.77
GCM1Q9NP62 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
GCM1Q9NP62 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
GCM1Q9NP62 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GCM1Q9NP62 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GCM1Q9NP62 KRT18P24-201ENST00000344739 1156 ntBASIC19.87■□□□□ 0.77
GCM1Q9NP62 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GCM1Q9NP62 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.87■□□□□ 0.77
GCM1Q9NP62 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.87■□□□□ 0.77
GCM1Q9NP62 AL031848.2-201ENST00000607670 837 ntBASIC19.87■□□□□ 0.77
GCM1Q9NP62 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GCM1Q9NP62 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.87■□□□□ 0.77
GCM1Q9NP62 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.86■□□□□ 0.77
GCM1Q9NP62 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GCM1Q9NP62 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GCM1Q9NP62 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GCM1Q9NP62 AC120024.1-201ENST00000562672 995 ntBASIC19.85■□□□□ 0.77
GCM1Q9NP62 THA1P-201ENST00000590384 1145 ntBASIC19.85■□□□□ 0.77
GCM1Q9NP62 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GCM1Q9NP62 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GCM1Q9NP62 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GCM1Q9NP62 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms