Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CNTNAP3Q9BZ76 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.56■■□□□ 1.2
CNTNAP3Q9BZ76 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.55■■□□□ 1.2
CNTNAP3Q9BZ76 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNTNAP3Q9BZ76 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNTNAP3Q9BZ76 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.55■■□□□ 1.2
CNTNAP3Q9BZ76 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNTNAP3Q9BZ76 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CNTNAP3Q9BZ76 AC027682.1-201ENST00000562846 899 ntBASIC22.54■■□□□ 1.2
CNTNAP3Q9BZ76 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CNTNAP3Q9BZ76 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CNTNAP3Q9BZ76 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNTNAP3Q9BZ76 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.53■■□□□ 1.2
CNTNAP3Q9BZ76 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.53■■□□□ 1.2
CNTNAP3Q9BZ76 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 AC100797.4-201ENST00000631653 1827 ntBASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNTNAP3Q9BZ76 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L19-201ENST00000557448 1267 ntBASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CNTNAP3Q9BZ76 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CNTNAP3Q9BZ76 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CNTNAP3Q9BZ76 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.5■■□□□ 1.19
CNTNAP3Q9BZ76 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.5■■□□□ 1.19
CNTNAP3Q9BZ76 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CNTNAP3Q9BZ76 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.5■■□□□ 1.19
CNTNAP3Q9BZ76 AL135925.1-201ENST00000605920 1701 ntBASIC22.49■■□□□ 1.19
CNTNAP3Q9BZ76 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.49■■□□□ 1.19
CNTNAP3Q9BZ76 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNTNAP3Q9BZ76 AC008764.7-201ENST00000593779 1081 ntBASIC22.49■■□□□ 1.19
CNTNAP3Q9BZ76 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.49■■□□□ 1.19
CNTNAP3Q9BZ76 AL031602.1-201ENST00000633169 911 ntBASIC22.49■■□□□ 1.19
CNTNAP3Q9BZ76 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNTNAP3Q9BZ76 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L2-201ENST00000561772 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L6-201ENST00000626483 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L1-201ENST00000627662 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L8-201ENST00000629013 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L3-201ENST00000630187 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L7-201ENST00000630678 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DUX4L5-201ENST00000630834 1275 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 AC139426.1-201ENST00000568218 2529 ntBASIC22.47■■□□□ 1.19
CNTNAP3Q9BZ76 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNTNAP3Q9BZ76 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.45■■□□□ 1.18
CNTNAP3Q9BZ76 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNTNAP3Q9BZ76 AP002414.2-202ENST00000590929 1450 ntBASIC22.45■■□□□ 1.18
CNTNAP3Q9BZ76 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNTNAP3Q9BZ76 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CNTNAP3Q9BZ76 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.44■■□□□ 1.18
CNTNAP3Q9BZ76 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.44■■□□□ 1.18
CNTNAP3Q9BZ76 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.44■■□□□ 1.18
CNTNAP3Q9BZ76 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 SYT6-210ENST00000641643 1587 ntBASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.43■■□□□ 1.18
CNTNAP3Q9BZ76 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNTNAP3Q9BZ76 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.42■■□□□ 1.18
CNTNAP3Q9BZ76 AC099791.1-201ENST00000416440 715 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms