Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUX3Q96PT4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUX3Q96PT4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUX3Q96PT4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUX3Q96PT4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.19■□□□□ 0.5
DUX3Q96PT4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUX3Q96PT4 TSPY9P-201ENST00000440215 945 ntBASIC18.19■□□□□ 0.5
DUX3Q96PT4 TSPY11P-201ENST00000442607 1045 ntBASIC18.19■□□□□ 0.5
DUX3Q96PT4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.19■□□□□ 0.5
DUX3Q96PT4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DUX3Q96PT4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DUX3Q96PT4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DUX3Q96PT4 FOXO3B-201ENST00000395675 1928 ntBASIC18.19■□□□□ 0.5
DUX3Q96PT4 AC010501.1-201ENST00000606270 1962 ntBASIC18.19■□□□□ 0.5
DUX3Q96PT4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DUX3Q96PT4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DUX3Q96PT4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DUX3Q96PT4 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.18■□□□□ 0.5
DUX3Q96PT4 MIR4281-201ENST00000580852 62 ntBASIC18.18■□□□□ 0.5
DUX3Q96PT4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.18■□□□□ 0.5
DUX3Q96PT4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.17■□□□□ 0.5
DUX3Q96PT4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DUX3Q96PT4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.17■□□□□ 0.5
DUX3Q96PT4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DUX3Q96PT4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUX3Q96PT4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUX3Q96PT4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.16■□□□□ 0.5
DUX3Q96PT4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUX3Q96PT4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
DUX3Q96PT4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.16■□□□□ 0.5
DUX3Q96PT4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUX3Q96PT4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.16■□□□□ 0.5
DUX3Q96PT4 AC097639.1-201ENST00000565519 1891 ntBASIC18.16■□□□□ 0.5
DUX3Q96PT4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
DUX3Q96PT4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.15■□□□□ 0.5
DUX3Q96PT4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DUX3Q96PT4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DUX3Q96PT4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.15■□□□□ 0.5
DUX3Q96PT4 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.15■□□□□ 0.5
DUX3Q96PT4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
DUX3Q96PT4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DUX3Q96PT4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
DUX3Q96PT4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.14■□□□□ 0.49
DUX3Q96PT4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.14■□□□□ 0.49
DUX3Q96PT4 UNC93B8-201ENST00000511903 705 ntBASIC18.14■□□□□ 0.49
DUX3Q96PT4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.14■□□□□ 0.49
DUX3Q96PT4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DUX3Q96PT4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.13■□□□□ 0.49
DUX3Q96PT4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
DUX3Q96PT4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DUX3Q96PT4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.13■□□□□ 0.49
DUX3Q96PT4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DUX3Q96PT4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.13■□□□□ 0.49
DUX3Q96PT4 AC137630.3-201ENST00000607245 391 ntBASIC18.13■□□□□ 0.49
DUX3Q96PT4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DUX3Q96PT4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DUX3Q96PT4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DUX3Q96PT4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
DUX3Q96PT4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.12■□□□□ 0.49
DUX3Q96PT4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.12■□□□□ 0.49
DUX3Q96PT4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.12■□□□□ 0.49
DUX3Q96PT4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
DUX3Q96PT4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
DUX3Q96PT4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
DUX3Q96PT4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUX3Q96PT4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.11■□□□□ 0.49
DUX3Q96PT4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.11■□□□□ 0.49
DUX3Q96PT4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.11■□□□□ 0.49
DUX3Q96PT4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUX3Q96PT4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.11■□□□□ 0.49
DUX3Q96PT4 KRT16P3-201ENST00000439127 1283 ntBASIC18.11■□□□□ 0.49
DUX3Q96PT4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DUX3Q96PT4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
DUX3Q96PT4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.11■□□□□ 0.49
DUX3Q96PT4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DUX3Q96PT4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.1■□□□□ 0.49
DUX3Q96PT4 AC021242.3-201ENST00000607598 1377 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms