Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PRICKLE1Q96MT3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.28■■□□□ 1.48
PRICKLE1Q96MT3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.28■■□□□ 1.48
PRICKLE1Q96MT3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.28■■□□□ 1.48
PRICKLE1Q96MT3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PRICKLE1Q96MT3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PRICKLE1Q96MT3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PRICKLE1Q96MT3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 MIR4281-201ENST00000580852 62 ntBASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 AC011551.1-201ENST00000614101 683 ntBASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.26■■□□□ 1.47
PRICKLE1Q96MT3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PRICKLE1Q96MT3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.24■■□□□ 1.47
PRICKLE1Q96MT3 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.23■■□□□ 1.47
PRICKLE1Q96MT3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PRICKLE1Q96MT3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.23■■□□□ 1.47
PRICKLE1Q96MT3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
PRICKLE1Q96MT3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.22■■□□□ 1.47
PRICKLE1Q96MT3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.22■■□□□ 1.47
PRICKLE1Q96MT3 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.22■■□□□ 1.47
PRICKLE1Q96MT3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PRICKLE1Q96MT3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.22■■□□□ 1.47
PRICKLE1Q96MT3 SLC6A10P-202ENST00000431994 2058 ntBASIC24.22■■□□□ 1.47
PRICKLE1Q96MT3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PRICKLE1Q96MT3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
PRICKLE1Q96MT3 AC239859.2-201ENST00000444165 318 ntBASIC24.2■■□□□ 1.46
PRICKLE1Q96MT3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PRICKLE1Q96MT3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.2■■□□□ 1.46
PRICKLE1Q96MT3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 GUSBP5-201ENST00000418136 578 ntBASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 Z92544.1-202ENST00000571933 1220 ntBASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PRICKLE1Q96MT3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.18■■□□□ 1.46
PRICKLE1Q96MT3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.18■■□□□ 1.46
PRICKLE1Q96MT3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PRICKLE1Q96MT3 AC137630.3-201ENST00000607245 391 ntBASIC24.18■■□□□ 1.46
PRICKLE1Q96MT3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 AC090877.2-201ENST00000558441 1738 ntBASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PRICKLE1Q96MT3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PRICKLE1Q96MT3 BX664725.1-201ENST00000438252 379 ntBASIC24.16■■□□□ 1.46
PRICKLE1Q96MT3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRICKLE1Q96MT3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRICKLE1Q96MT3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PRICKLE1Q96MT3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.16■■□□□ 1.46
PRICKLE1Q96MT3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms